Cluster: CokerMO_2019_SRR8692215_bin.31_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_67 | 72130 | 73458 | - | 2.A.22.5.2 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_68 | 73762 | 75681 | + | PL33_1 |
| STP | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_69 | 75859 | 77001 | - | Peripla_BP_1 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_70 | 77092 | 78096 | - | 3.A.1.2.15 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_71 | 78115 | 79608 | - | 3.A.1.2.1 |
| STP | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_72 | 79771 | 80751 | - | Peripla_BP_1 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_73 | 80748 | 82529 | - | 8.A.59.2.1 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_67
Type: TC
Location: 72130 - 73458 (-)
Type: TC
Location: 72130 - 73458 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_68
Type: CAZyme
Location: 73762 - 75681 (+)
Type: CAZyme
Location: 73762 - 75681 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_69
Type: STP
Location: 75859 - 77001 (-)
Type: STP
Location: 75859 - 77001 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_70
Type: TC
Location: 77092 - 78096 (-)
Type: TC
Location: 77092 - 78096 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_71
Type: TC
Location: 78115 - 79608 (-)
Type: TC
Location: 78115 - 79608 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_72
Type: STP
Location: 79771 - 80751 (-)
Type: STP
Location: 79771 - 80751 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_73
Type: TC
Location: 80748 - 82529 (-)
Type: TC
Location: 80748 - 82529 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.