Cluster: CokerMO_2019_SRR8692215_bin.31_CGC56
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- CGC Family ID: CGCFAM_01626
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_98 | 122519 | 124249 | - | 8.A.59.2.1 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_99 | 124270 | 125175 | - | 3.A.1.1.9 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_100 | 125190 | 126119 | - | 3.A.1.1.9 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_101 | 126182 | 127900 | - | 3.A.1.1.9 |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_102 | 128504 | 129322 | - | HTH_AraC | HTH_AraC |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_103 | 129473 | 130795 | + | GH4 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_98
Type: TC
Location: 122519 - 124249 (-)
Type: TC
Location: 122519 - 124249 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_99
Type: TC
Location: 124270 - 125175 (-)
Type: TC
Location: 124270 - 125175 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_100
Type: TC
Location: 125190 - 126119 (-)
Type: TC
Location: 125190 - 126119 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_101
Type: TC
Location: 126182 - 127900 (-)
Type: TC
Location: 126182 - 127900 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_102
Type: TF
Location: 128504 - 129322 (-)
Type: TF
Location: 128504 - 129322 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_103
Type: CAZyme
Location: 129473 - 130795 (+)
Type: CAZyme
Location: 129473 - 130795 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.