Cluster: CokerMO_2019_SRR8692215_bin.31_CGC55
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_53 | 68010 | 69422 | - | 9.A.11.1.1 |
| STP | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_54 | 69665 | 73195 | - | Fer4 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_55 | 73349 | 74212 | - | GH43_17 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_56 | 74408 | 75670 | + | IMS | IMS_C |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_57 | 75683 | 76003 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_58 | 76143 | 76787 | + | 1.A.16.3.3 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_59 | 77030 | 77863 | + | Acetyltransf_1 | Acetyltransf_10 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_60 | 77947 | 78678 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_61 | 78770 | 79423 | - | 9.A.11.1.1 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_62 | 79420 | 79896 | - | SpoVAC_SpoVAEB |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_63 | 79900 | 80319 | - | SpoVAB |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_53191 | CokerMO_2019_SRR8692215_bin.31_k141_53191_64 | 80349 | 80972 | - | 9.A.11.1.1 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_53
Type: TC
Location: 68010 - 69422 (-)
Type: TC
Location: 68010 - 69422 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_54
Type: STP
Location: 69665 - 73195 (-)
Type: STP
Location: 69665 - 73195 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_55
Type: CAZyme
Location: 73349 - 74212 (-)
Type: CAZyme
Location: 73349 - 74212 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_56
Type: pfam
Location: 74408 - 75670 (+)
Type: pfam
Location: 74408 - 75670 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_57
Type:
Location: 75683 - 76003 (+)
Type:
Location: 75683 - 76003 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_58
Type: TC
Location: 76143 - 76787 (+)
Type: TC
Location: 76143 - 76787 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_59
Type: pfam
Location: 77030 - 77863 (+)
Type: pfam
Location: 77030 - 77863 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_60
Type:
Location: 77947 - 78678 (-)
Type:
Location: 77947 - 78678 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_61
Type: TC
Location: 78770 - 79423 (-)
Type: TC
Location: 78770 - 79423 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_62
Type: pfam
Location: 79420 - 79896 (-)
Type: pfam
Location: 79420 - 79896 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_63
Type: pfam
Location: 79900 - 80319 (-)
Type: pfam
Location: 79900 - 80319 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_53191_64
Type: TC
Location: 80349 - 80972 (-)
Type: TC
Location: 80349 - 80972 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.