Cluster: CokerMO_2019_SRR8692215_bin.31_CGC53
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_63 | 80525 | 82264 | + | 3.A.1.106.2 |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_64 | 82315 | 83187 | - | HTH_AraC | HTH_AraC |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_65 | 83316 | 85940 | + | GH2 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_66 | 86168 | 87352 | + | HlyD_3 | HlyD_D23 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_67 | 87349 | 88026 | + | 3.A.1.122.2 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_68 | 88023 | 89774 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_69 | 89767 | 91020 | + | 3.A.1.122.2 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_70 | 91359 | 92129 | + | ADI | DDAH_eukar |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_71 | 92324 | 93712 | + | 2.A.118.1.4 |
| peptidase | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_72 | 93738 | 94922 | + | M20.UPD |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_73 | 95131 | 96249 | + | 2.A.45.2.6 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_63
Type: TC
Location: 80525 - 82264 (+)
Type: TC
Location: 80525 - 82264 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_64
Type: TF
Location: 82315 - 83187 (-)
Type: TF
Location: 82315 - 83187 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_65
Type: CAZyme
Location: 83316 - 85940 (+)
Type: CAZyme
Location: 83316 - 85940 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_66
Type: pfam
Location: 86168 - 87352 (+)
Type: pfam
Location: 86168 - 87352 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_67
Type: TC
Location: 87349 - 88026 (+)
Type: TC
Location: 87349 - 88026 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_68
Type:
Location: 88023 - 89774 (+)
Type:
Location: 88023 - 89774 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_69
Type: TC
Location: 89767 - 91020 (+)
Type: TC
Location: 89767 - 91020 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_70
Type: pfam
Location: 91359 - 92129 (+)
Type: pfam
Location: 91359 - 92129 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_71
Type: TC
Location: 92324 - 93712 (+)
Type: TC
Location: 92324 - 93712 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_72
Type: peptidase
Location: 93738 - 94922 (+)
Type: peptidase
Location: 93738 - 94922 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_73
Type: TC
Location: 95131 - 96249 (+)
Type: TC
Location: 95131 - 96249 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.