Cluster: CokerMO_2019_SRR8692215_bin.31_CGC51
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_40 | 51612 | 53345 | + | 9.B.33.1.1 |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_41 | 53320 | 54801 | + | HTH_AraC | HTH_AraC |
| STP | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_42 | 54947 | 56275 | + | SBP_bac_1 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_43 | 56354 | 57256 | + | 3.A.1.1.34 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_44 | 57272 | 58126 | + | 3.A.1.1.39 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_45 | 58153 | 60978 | + | GH106 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_46 | 61151 | 61531 | + | Cupin_2 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_47 | 61553 | 62410 | - | Tocopherol_cycl |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_48 | 62627 | 63760 | - | CE9 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_40
Type: TC
Location: 51612 - 53345 (+)
Type: TC
Location: 51612 - 53345 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_41
Type: TF
Location: 53320 - 54801 (+)
Type: TF
Location: 53320 - 54801 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_42
Type: STP
Location: 54947 - 56275 (+)
Type: STP
Location: 54947 - 56275 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_43
Type: TC
Location: 56354 - 57256 (+)
Type: TC
Location: 56354 - 57256 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_44
Type: TC
Location: 57272 - 58126 (+)
Type: TC
Location: 57272 - 58126 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_45
Type: CAZyme
Location: 58153 - 60978 (+)
Type: CAZyme
Location: 58153 - 60978 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_46
Type: pfam
Location: 61151 - 61531 (+)
Type: pfam
Location: 61151 - 61531 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_47
Type: pfam
Location: 61553 - 62410 (-)
Type: pfam
Location: 61553 - 62410 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_48
Type: CAZyme
Location: 62627 - 63760 (-)
Type: CAZyme
Location: 62627 - 63760 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.