Cluster: CokerMO_2019_SRR8692215_bin.31_CGC50
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_7 | 11687 | 14122 | + | GH2 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_8 | 14143 | 15039 | + | NAT_N | GNAT_C |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_9 | 15127 | 15552 | + | HIT |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_10 | 15604 | 17766 | + | GH112 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_11 | 18087 | 23486 | + | fn3 | fn3 | F5_F8_type_C | Peptidase_M60 | F5_F8_type_C_2 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_12 | 23525 | 24490 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_50400 | CokerMO_2019_SRR8692215_bin.31_k141_50400_13 | 24679 | 25674 | + | 8.A.5.1.6 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_7
Type: CAZyme
Location: 11687 - 14122 (+)
Type: CAZyme
Location: 11687 - 14122 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_8
Type: pfam
Location: 14143 - 15039 (+)
Type: pfam
Location: 14143 - 15039 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_9
Type: pfam
Location: 15127 - 15552 (+)
Type: pfam
Location: 15127 - 15552 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_10
Type: CAZyme
Location: 15604 - 17766 (+)
Type: CAZyme
Location: 15604 - 17766 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_11
Type: pfam
Location: 18087 - 23486 (+)
Type: pfam
Location: 18087 - 23486 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_12
Type:
Location: 23525 - 24490 (+)
Type:
Location: 23525 - 24490 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_50400_13
Type: TC
Location: 24679 - 25674 (+)
Type: TC
Location: 24679 - 25674 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.