Cluster: CokerMO_2019_SRR8692215_bin.31_CGC44
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692215_bin.31_k141_43774 | CokerMO_2019_SRR8692215_bin.31_k141_43774_5 | 4847 | 5578 | + | 3.A.1.25.5 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_43774 | CokerMO_2019_SRR8692215_bin.31_k141_43774_6 | 5599 | 6516 | + | SUFBD_core |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_43774 | CokerMO_2019_SRR8692215_bin.31_k141_43774_7 | 6656 | 7519 | - | HTH_AraC | HTH_AraC |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_43774 | CokerMO_2019_SRR8692215_bin.31_k141_43774_8 | 7666 | 9093 | + | GH29 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_43774_5
Type: TC
Location: 4847 - 5578 (+)
Type: TC
Location: 4847 - 5578 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_43774_6
Type: pfam
Location: 5599 - 6516 (+)
Type: pfam
Location: 5599 - 6516 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_43774_7
Type: TF
Location: 6656 - 7519 (-)
Type: TF
Location: 6656 - 7519 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_43774_8
Type: CAZyme
Location: 7666 - 9093 (+)
Type: CAZyme
Location: 7666 - 9093 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.