Cluster: CokerMO_2019_SRR8692215_bin.31_CGC41
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_104 | 117732 | 120419 | - | GH106 |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_105 | 120416 | 121999 | - | HTH_AraC | HTH_AraC |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_106 | 122010 | 123752 | - | 8.A.59.2.1 |
| STP | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_107 | 124052 | 125629 | - | SBP_bac_1 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_108 | 125746 | 126645 | - | 3.A.1.1.10 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_109 | 126645 | 127628 | - | 3.A.1.1.10 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_110 | 128133 | 129527 | - | Cons_hypoth95 | MTS | tRNA_U5-meth_tr | Methyltransf_11 | Methyltransf_15 | Methyltransf_25 | Methyltransf_31 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_111 | 129627 | 129950 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_112 | 130071 | 132008 | - | PL33_1 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_113 | 132024 | 134045 | - | PL12 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_114 | 134209 | 135102 | - | 3.A.1.1.10 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_115 | 135123 | 136082 | - | 3.A.1.1.10 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_116 | 136630 | 138486 | - | 3.A.1.1.9 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_117 | 138868 | 140712 | - | 3.A.1.1.9 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_118 | 140709 | 140810 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_119 | 141178 | 142980 | - | PL33_1 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_31568 | CokerMO_2019_SRR8692215_bin.31_k141_31568_120 | 142998 | 144962 | - | PL12 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_104
Type: CAZyme
Location: 117732 - 120419 (-)
Type: CAZyme
Location: 117732 - 120419 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_105
Type: TF
Location: 120416 - 121999 (-)
Type: TF
Location: 120416 - 121999 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_106
Type: TC
Location: 122010 - 123752 (-)
Type: TC
Location: 122010 - 123752 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_107
Type: STP
Location: 124052 - 125629 (-)
Type: STP
Location: 124052 - 125629 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_108
Type: TC
Location: 125746 - 126645 (-)
Type: TC
Location: 125746 - 126645 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_109
Type: TC
Location: 126645 - 127628 (-)
Type: TC
Location: 126645 - 127628 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_110
Type: pfam
Location: 128133 - 129527 (-)
Type: pfam
Location: 128133 - 129527 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_111
Type:
Location: 129627 - 129950 (-)
Type:
Location: 129627 - 129950 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_112
Type: CAZyme
Location: 130071 - 132008 (-)
Type: CAZyme
Location: 130071 - 132008 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_113
Type: CAZyme
Location: 132024 - 134045 (-)
Type: CAZyme
Location: 132024 - 134045 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_114
Type: TC
Location: 134209 - 135102 (-)
Type: TC
Location: 134209 - 135102 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_115
Type: TC
Location: 135123 - 136082 (-)
Type: TC
Location: 135123 - 136082 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_116
Type: TC
Location: 136630 - 138486 (-)
Type: TC
Location: 136630 - 138486 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_117
Type: TC
Location: 138868 - 140712 (-)
Type: TC
Location: 138868 - 140712 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_118
Type:
Location: 140709 - 140810 (-)
Type:
Location: 140709 - 140810 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_119
Type: CAZyme
Location: 141178 - 142980 (-)
Type: CAZyme
Location: 141178 - 142980 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_31568_120
Type: CAZyme
Location: 142998 - 144962 (-)
Type: CAZyme
Location: 142998 - 144962 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.