Cluster: CokerMO_2019_SRR8692215_bin.31_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_39 | 41105 | 42133 | + | 2.A.98.1.4 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_40 | 42239 | 42403 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_41 | 42434 | 42808 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_42 | 43083 | 44999 | - | GH129 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_43 | 45229 | 45726 | - | QueT |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_44 | 45832 | 46272 | - | RbsD_FucU |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_45 | 46299 | 47606 | - | GH29 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_39
Type: TC
Location: 41105 - 42133 (+)
Type: TC
Location: 41105 - 42133 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_40
Type:
Location: 42239 - 42403 (-)
Type:
Location: 42239 - 42403 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_41
Type:
Location: 42434 - 42808 (-)
Type:
Location: 42434 - 42808 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_42
Type: CAZyme
Location: 43083 - 44999 (-)
Type: CAZyme
Location: 43083 - 44999 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_43
Type: pfam
Location: 45229 - 45726 (-)
Type: pfam
Location: 45229 - 45726 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_44
Type: pfam
Location: 45832 - 46272 (-)
Type: pfam
Location: 45832 - 46272 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_45
Type: CAZyme
Location: 46299 - 47606 (-)
Type: CAZyme
Location: 46299 - 47606 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.