Cluster: CokerMO_2019_SRR8692215_bin.31_CGC37
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- CGC Family ID: CGCFAM_01784
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692215_bin.31_k141_29124 | CokerMO_2019_SRR8692215_bin.31_k141_29124_16 | 17005 | 18375 | - | 2.A.66.1.32 |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_29124 | CokerMO_2019_SRR8692215_bin.31_k141_29124_17 | 18368 | 18820 | - | MarR |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_29124 | CokerMO_2019_SRR8692215_bin.31_k141_29124_18 | 19046 | 19219 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_29124 | CokerMO_2019_SRR8692215_bin.31_k141_29124_19 | 19295 | 22045 | - | 3.A.3.4.1 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_29124 | CokerMO_2019_SRR8692215_bin.31_k141_29124_20 | 22475 | 25219 | - | CBM67 | GH78 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_29124_16
Type: TC
Location: 17005 - 18375 (-)
Type: TC
Location: 17005 - 18375 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_29124_17
Type: TF
Location: 18368 - 18820 (-)
Type: TF
Location: 18368 - 18820 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_29124_18
Type:
Location: 19046 - 19219 (-)
Type:
Location: 19046 - 19219 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_29124_19
Type: TC
Location: 19295 - 22045 (-)
Type: TC
Location: 19295 - 22045 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_29124_20
Type: CAZyme
Location: 22475 - 25219 (-)
Type: CAZyme
Location: 22475 - 25219 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.