Cluster: CokerMO_2019_SRR8692215_bin.31_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- CGC Family ID: CGCFAM_04260
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_26654 | CokerMO_2019_SRR8692215_bin.31_k141_26654_165 | 181243 | 183441 | + | GH3 |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_26654 | CokerMO_2019_SRR8692215_bin.31_k141_26654_166 | 183430 | 184284 | - | HTH_AraC | HTH_AraC |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_26654 | CokerMO_2019_SRR8692215_bin.31_k141_26654_167 | 184500 | 187520 | + | GH2 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_26654 | CokerMO_2019_SRR8692215_bin.31_k141_26654_168 | 187517 | 188365 | + | S6PP | Hydrolase_3 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_26654 | CokerMO_2019_SRR8692215_bin.31_k141_26654_169 | 188746 | 190335 | + | 3.A.1.121.2 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_26654_165
Type: CAZyme
Location: 181243 - 183441 (+)
Type: CAZyme
Location: 181243 - 183441 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_26654_166
Type: TF
Location: 183430 - 184284 (-)
Type: TF
Location: 183430 - 184284 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_26654_167
Type: CAZyme
Location: 184500 - 187520 (+)
Type: CAZyme
Location: 184500 - 187520 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_26654_168
Type: pfam
Location: 187517 - 188365 (+)
Type: pfam
Location: 187517 - 188365 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_26654_169
Type: TC
Location: 188746 - 190335 (+)
Type: TC
Location: 188746 - 190335 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.