Cluster: CokerMO_2019_SRR8692215_bin.31_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- CGC Family ID: CGCFAM_00133
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_212 | 245781 | 246794 | - | GH179 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_213 | 246937 | 248664 | - | 3.A.1.1.10 |
| STP | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_214 | 248806 | 250161 | - | SBP_bac_1 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_215 | 250404 | 252221 | + | 8.A.59.2.1 |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_216 | 252249 | 253859 | + | HTH_AraC | HTH_AraC |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_217 | 253926 | 256028 | - | GH42 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_212
Type: CAZyme
Location: 245781 - 246794 (-)
Type: CAZyme
Location: 245781 - 246794 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_213
Type: TC
Location: 246937 - 248664 (-)
Type: TC
Location: 246937 - 248664 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_214
Type: STP
Location: 248806 - 250161 (-)
Type: STP
Location: 248806 - 250161 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_215
Type: TC
Location: 250404 - 252221 (+)
Type: TC
Location: 250404 - 252221 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_216
Type: TF
Location: 252249 - 253859 (+)
Type: TF
Location: 252249 - 253859 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_217
Type: CAZyme
Location: 253926 - 256028 (-)
Type: CAZyme
Location: 253926 - 256028 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.