Cluster: CokerMO_2019_SRR8692215_bin.31_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_148 | 170688 | 171587 | + | 3.A.1.126.1 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_149 | 171568 | 172353 | + | ABC2_membrane_2 |
| peptidase | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_150 | 172440 | 173861 | - | M20.UPA |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_151 | 174187 | 175350 | - | GH88 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_148
Type: TC
Location: 170688 - 171587 (+)
Type: TC
Location: 170688 - 171587 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_149
Type: pfam
Location: 171568 - 172353 (+)
Type: pfam
Location: 171568 - 172353 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_150
Type: peptidase
Location: 172440 - 173861 (-)
Type: peptidase
Location: 172440 - 173861 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_151
Type: CAZyme
Location: 174187 - 175350 (-)
Type: CAZyme
Location: 174187 - 175350 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.