Cluster: CokerMO_2019_SRR8692215_bin.31_CGC27
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_130 | 147786 | 150887 | - | GH106 |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_131 | 151115 | 152008 | + | HTH_AraC |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_132 | 152081 | 153973 | - | 3.A.1.135.5 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_133 | 153966 | 155699 | - | 3.A.1.135.5 |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_134 | 155717 | 156184 | - | MarR |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_135 | 156458 | 156856 | - | DUF454 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_136 | 156948 | 158510 | - | 2.A.49.5.5 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_137 | 158602 | 159213 | - | SRAP |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_138 | 159367 | 160773 | + | 2.A.66.1.33 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_139 | 160921 | 161487 | - | FMN_red |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_140 | 161551 | 162837 | - | GH27 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_141 | 163020 | 164318 | - | 3.A.1.121.4 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_130
Type: CAZyme
Location: 147786 - 150887 (-)
Type: CAZyme
Location: 147786 - 150887 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_131
Type: TF
Location: 151115 - 152008 (+)
Type: TF
Location: 151115 - 152008 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_132
Type: TC
Location: 152081 - 153973 (-)
Type: TC
Location: 152081 - 153973 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_133
Type: TC
Location: 153966 - 155699 (-)
Type: TC
Location: 153966 - 155699 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_134
Type: TF
Location: 155717 - 156184 (-)
Type: TF
Location: 155717 - 156184 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_135
Type: pfam
Location: 156458 - 156856 (-)
Type: pfam
Location: 156458 - 156856 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_136
Type: TC
Location: 156948 - 158510 (-)
Type: TC
Location: 156948 - 158510 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_137
Type: pfam
Location: 158602 - 159213 (-)
Type: pfam
Location: 158602 - 159213 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_138
Type: TC
Location: 159367 - 160773 (+)
Type: TC
Location: 159367 - 160773 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_139
Type: pfam
Location: 160921 - 161487 (-)
Type: pfam
Location: 160921 - 161487 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_140
Type: CAZyme
Location: 161551 - 162837 (-)
Type: CAZyme
Location: 161551 - 162837 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_141
Type: TC
Location: 163020 - 164318 (-)
Type: TC
Location: 163020 - 164318 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.