Cluster: CokerMO_2019_SRR8692215_bin.31_CGC26
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- CGC Family ID: CGCFAM_00133
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_110 | 125533 | 127509 | - | GH67 |
| STP | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_111 | 127547 | 127876 | - | AraC_binding |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_112 | 127921 | 128988 | - | GFO_IDH_MocA |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_113 | 129027 | 131576 | - | GH95 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_114 | 131602 | 133200 | - | 8.A.59.2.1 |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_115 | 133197 | 134183 | - | HTH_AraC | HTH_AraC |
| STP | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_116 | 134273 | 135847 | - | SBP_bac_1 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_117 | 135931 | 136821 | - | 3.A.1.1.29 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_118 | 136864 | 137811 | - | 3.A.1.1.10 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_110
Type: CAZyme
Location: 125533 - 127509 (-)
Type: CAZyme
Location: 125533 - 127509 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_111
Type: STP
Location: 127547 - 127876 (-)
Type: STP
Location: 127547 - 127876 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_112
Type: pfam
Location: 127921 - 128988 (-)
Type: pfam
Location: 127921 - 128988 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_113
Type: CAZyme
Location: 129027 - 131576 (-)
Type: CAZyme
Location: 129027 - 131576 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_114
Type: TC
Location: 131602 - 133200 (-)
Type: TC
Location: 131602 - 133200 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_115
Type: TF
Location: 133197 - 134183 (-)
Type: TF
Location: 133197 - 134183 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_116
Type: STP
Location: 134273 - 135847 (-)
Type: STP
Location: 134273 - 135847 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_117
Type: TC
Location: 135931 - 136821 (-)
Type: TC
Location: 135931 - 136821 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_118
Type: TC
Location: 136864 - 137811 (-)
Type: TC
Location: 136864 - 137811 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.