Cluster: CokerMO_2019_SRR8692215_bin.31_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- CGC Family ID: CGCFAM_00112
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_79 | 85857 | 89039 | - | GH38 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_80 | 89144 | 90961 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_81 | 91006 | 93111 | - | GH105 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_82 | 93223 | 94836 | - | 3.A.1.1.9 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_83 | 94948 | 95880 | - | 3.A.1.1.10 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_84 | 95908 | 96987 | - | 3.A.1.1.10 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_79
Type: CAZyme
Location: 85857 - 89039 (-)
Type: CAZyme
Location: 85857 - 89039 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_80
Type:
Location: 89144 - 90961 (-)
Type:
Location: 89144 - 90961 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_81
Type: CAZyme
Location: 91006 - 93111 (-)
Type: CAZyme
Location: 91006 - 93111 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_82
Type: TC
Location: 93223 - 94836 (-)
Type: TC
Location: 93223 - 94836 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_83
Type: TC
Location: 94948 - 95880 (-)
Type: TC
Location: 94948 - 95880 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_84
Type: TC
Location: 95908 - 96987 (-)
Type: TC
Location: 95908 - 96987 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.