Cluster: CokerMO_2019_SRR8692215_bin.31_CGC24
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_47 | 45228 | 46220 | - | GH109 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_48 | 46204 | 48600 | - | GH95 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_49 | 48914 | 49945 | + | Epimerase | Epimerase |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_50 | 50004 | 51632 | - | 3.A.18.1.1 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_51 | 52120 | 53496 | - | ABC2_membrane_2 | ABC2_membrane_3 | ABC2_membrane_4 | ABC2_membrane_5 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_52 | 53489 | 54454 | - | 3.A.1.131.1 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_53 | 54465 | 55076 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_23520 | CokerMO_2019_SRR8692215_bin.31_k141_23520_54 | 55480 | 56886 | + | 2.A.66.1.22 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_47
Type: CAZyme
Location: 45228 - 46220 (-)
Type: CAZyme
Location: 45228 - 46220 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_48
Type: CAZyme
Location: 46204 - 48600 (-)
Type: CAZyme
Location: 46204 - 48600 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_49
Type: pfam
Location: 48914 - 49945 (+)
Type: pfam
Location: 48914 - 49945 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_50
Type: TC
Location: 50004 - 51632 (-)
Type: TC
Location: 50004 - 51632 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_51
Type: pfam
Location: 52120 - 53496 (-)
Type: pfam
Location: 52120 - 53496 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_52
Type: TC
Location: 53489 - 54454 (-)
Type: TC
Location: 53489 - 54454 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_53
Type:
Location: 54465 - 55076 (-)
Type:
Location: 54465 - 55076 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_23520_54
Type: TC
Location: 55480 - 56886 (+)
Type: TC
Location: 55480 - 56886 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.