Cluster: CokerMO_2019_SRR8692215_bin.31_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- CGC Family ID: CGCFAM_00366
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_69 | 85365 | 88493 | - | GH106 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_70 | 88552 | 89580 | - | GH33 |
| STP | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_71 | 89713 | 91362 | - | SBP_bac_1 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_72 | 91425 | 92321 | - | 3.A.1.1.10 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_73 | 92333 | 93280 | - | 3.A.1.1.10 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_69
Type: CAZyme
Location: 85365 - 88493 (-)
Type: CAZyme
Location: 85365 - 88493 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_70
Type: CAZyme
Location: 88552 - 89580 (-)
Type: CAZyme
Location: 88552 - 89580 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_71
Type: STP
Location: 89713 - 91362 (-)
Type: STP
Location: 89713 - 91362 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_72
Type: TC
Location: 91425 - 92321 (-)
Type: TC
Location: 91425 - 92321 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_73
Type: TC
Location: 92333 - 93280 (-)
Type: TC
Location: 92333 - 93280 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.