Cluster: CokerMO_2019_SRR8692215_bin.31_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_22 | 27937 | 31188 | - | GH2 |
| STP | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_23 | 31421 | 32626 | - | Aminotran_1_2 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_24 | 32661 | 33284 | - | PAS_6 | HTH_22 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_25 | 33311 | 34321 | - | 3.A.1.5.15 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_26 | 34332 | 35351 | - | 3.A.1.5.19 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_27 | 35407 | 36336 | - | 3.A.1.5.2 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_28 | 36347 | 37267 | - | 3.A.1.5.19 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_29 | 37351 | 39066 | - | 3.A.1.5.25 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_22
Type: CAZyme
Location: 27937 - 31188 (-)
Type: CAZyme
Location: 27937 - 31188 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_23
Type: STP
Location: 31421 - 32626 (-)
Type: STP
Location: 31421 - 32626 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_24
Type: pfam
Location: 32661 - 33284 (-)
Type: pfam
Location: 32661 - 33284 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_25
Type: TC
Location: 33311 - 34321 (-)
Type: TC
Location: 33311 - 34321 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_26
Type: TC
Location: 34332 - 35351 (-)
Type: TC
Location: 34332 - 35351 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_27
Type: TC
Location: 35407 - 36336 (-)
Type: TC
Location: 35407 - 36336 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_28
Type: TC
Location: 36347 - 37267 (-)
Type: TC
Location: 36347 - 37267 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_29
Type: TC
Location: 37351 - 39066 (-)
Type: TC
Location: 37351 - 39066 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.