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Cluster: CokerMO_2019_SRR8692215_bin.31_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_32 46429 47754 - 2.A.66.1.34
STP CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_33 47741 48301 - TetR_N
CAZyme CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_34 48433 49779 - GH1
CAZyme CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_35 49791 51026 - GH43_2
sulfatase CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_36 51042 52448 - S1_97
pfam CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_37 52471 53757 - DUF3604
CAZyme CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_38 53822 55483 - GH78
CAZyme CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_39 55511 58555 - GH106
TC CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_40 58593 59495 - 3.A.1.1.10
TC CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_41 59509 60453 - 3.A.1.1.10
TF CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_42 60812 63034 + HTH_AraC
CAZyme CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_43 63130 64329 - GH175
TC CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_44 64412 66004 - 3.A.1.1.10
TC CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_45 66267 67859 - 3.A.1.1.10
CAZyme CokerMO_2019_SRR8692215_bin.31_k141_4186 CokerMO_2019_SRR8692215_bin.31_k141_4186_46 68068 70596 - GH78
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_32
Type: TC
Location: 46429 - 47754 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_33
Type: STP
Location: 47741 - 48301 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_34
Type: CAZyme
Location: 48433 - 49779 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_35
Type: CAZyme
Location: 49791 - 51026 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_36
Type: sulfatase
Location: 51042 - 52448 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_37
Type: pfam
Location: 52471 - 53757 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_38
Type: CAZyme
Location: 53822 - 55483 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_39
Type: CAZyme
Location: 55511 - 58555 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_40
Type: TC
Location: 58593 - 59495 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_41
Type: TC
Location: 59509 - 60453 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_42
Type: TF
Location: 60812 - 63034 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_43
Type: CAZyme
Location: 63130 - 64329 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_44
Type: TC
Location: 64412 - 66004 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_45
Type: TC
Location: 66267 - 67859 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_4186_46
Type: CAZyme
Location: 68068 - 70596 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Fimimorpha
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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