Cluster: CokerMO_2019_SRR8692215_bin.31_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_1 | 175 | 1752 | - | 3.A.1.120.4 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_2 | 2208 | 3191 | - | Lipase_GDSL_3 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_3 | 3195 | 4697 | - | CBM91 | GH43_12 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_4 | 4960 | 8394 | - | GH115 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_5 | 8523 | 11153 | - | PL26 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_16871 | CokerMO_2019_SRR8692215_bin.31_k141_16871_6 | 11289 | 11912 | - | 3.A.1.6.1 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_1
Type: TC
Location: 175 - 1752 (-)
Type: TC
Location: 175 - 1752 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_2
Type: pfam
Location: 2208 - 3191 (-)
Type: pfam
Location: 2208 - 3191 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_3
Type: CAZyme
Location: 3195 - 4697 (-)
Type: CAZyme
Location: 3195 - 4697 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_4
Type: CAZyme
Location: 4960 - 8394 (-)
Type: CAZyme
Location: 4960 - 8394 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_5
Type: CAZyme
Location: 8523 - 11153 (-)
Type: CAZyme
Location: 8523 - 11153 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_16871_6
Type: TC
Location: 11289 - 11912 (-)
Type: TC
Location: 11289 - 11912 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.