Cluster: CokerMO_2019_SRR8692215_bin.31_CGC13
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_276 | 295666 | 296577 | - | 3.A.1.1.29 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_277 | 296597 | 297547 | - | 3.A.1.1.29 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_278 | 297687 | 297848 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_279 | 297848 | 299605 | - | 9.B.33.1.1 |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_280 | 299595 | 301181 | - | HTH_AraC | HTH_AraC |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_281 | 301344 | 302510 | - | PL22 | PL22_2 |
| STP | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_282 | 302524 | 304068 | - | SBP_bac_1 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_283 | 304121 | 305035 | - | 3.A.1.1.29 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_284 | 305061 | 305984 | - | 3.A.1.1.10 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_285 | 305926 | 306024 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_286 | 306266 | 308518 | + | HTH_AraC |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_287 | 308604 | 310244 | - | 2.A.58.2.2 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_288 | 310414 | 313596 | - | 3.A.1.137.2 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_289 | 313613 | 314317 | - | 3.A.1.122.14 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_290 | 314652 | 314864 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_291 | 315351 | 317105 | - | CE12 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_276
Type: TC
Location: 295666 - 296577 (-)
Type: TC
Location: 295666 - 296577 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_277
Type: TC
Location: 296597 - 297547 (-)
Type: TC
Location: 296597 - 297547 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_278
Type:
Location: 297687 - 297848 (-)
Type:
Location: 297687 - 297848 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_279
Type: TC
Location: 297848 - 299605 (-)
Type: TC
Location: 297848 - 299605 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_280
Type: TF
Location: 299595 - 301181 (-)
Type: TF
Location: 299595 - 301181 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_281
Type: CAZyme
Location: 301344 - 302510 (-)
Type: CAZyme
Location: 301344 - 302510 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_282
Type: STP
Location: 302524 - 304068 (-)
Type: STP
Location: 302524 - 304068 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_283
Type: TC
Location: 304121 - 305035 (-)
Type: TC
Location: 304121 - 305035 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_284
Type: TC
Location: 305061 - 305984 (-)
Type: TC
Location: 305061 - 305984 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_285
Type:
Location: 305926 - 306024 (-)
Type:
Location: 305926 - 306024 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_286
Type: TF
Location: 306266 - 308518 (+)
Type: TF
Location: 306266 - 308518 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_287
Type: TC
Location: 308604 - 310244 (-)
Type: TC
Location: 308604 - 310244 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_288
Type: TC
Location: 310414 - 313596 (-)
Type: TC
Location: 310414 - 313596 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_289
Type: TC
Location: 313613 - 314317 (-)
Type: TC
Location: 313613 - 314317 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_290
Type:
Location: 314652 - 314864 (-)
Type:
Location: 314652 - 314864 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_291
Type: CAZyme
Location: 315351 - 317105 (-)
Type: CAZyme
Location: 315351 - 317105 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.