Cluster: CokerMO_2019_SRR8692215_bin.31_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_250 | 261625 | 262731 | - | GH179 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_251 | 262780 | 263502 | - | ThuA |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_252 | 263556 | 264611 | - | GH179 |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_253 | 264802 | 265599 | + | HTH_AraC |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_254 | 265758 | 267128 | - | GH29 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_255 | 267307 | 269130 | - | 3.A.1.1.9 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_256 | 269295 | 272231 | - | GH95 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_250
Type: CAZyme
Location: 261625 - 262731 (-)
Type: CAZyme
Location: 261625 - 262731 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_251
Type: pfam
Location: 262780 - 263502 (-)
Type: pfam
Location: 262780 - 263502 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_252
Type: CAZyme
Location: 263556 - 264611 (-)
Type: CAZyme
Location: 263556 - 264611 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_253
Type: TF
Location: 264802 - 265599 (+)
Type: TF
Location: 264802 - 265599 (+)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_254
Type: CAZyme
Location: 265758 - 267128 (-)
Type: CAZyme
Location: 265758 - 267128 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_255
Type: TC
Location: 267307 - 269130 (-)
Type: TC
Location: 267307 - 269130 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_256
Type: CAZyme
Location: 269295 - 272231 (-)
Type: CAZyme
Location: 269295 - 272231 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.