Cluster: CokerMO_2019_SRR8692215_bin.31_CGC10
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_173 | 175573 | 176658 | - | GH179 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_174 | 176685 | 177560 | - | AP_endonuc_2 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_175 | 177575 | 178348 | - | AP_endonuc_2 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_176 | 178387 | 179445 | - | GH179 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_177 | 179519 | 180616 | - | AP_endonuc_2 |
| pfam | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_178 | 180645 | 181463 | - | AP_endonuc_2 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_179 | 181540 | 182700 | - | GH179 |
| peptidase | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_180 | 183153 | 183797 | - | C15.001 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_181 | 183883 | 184827 | - | 9.B.211.1.2 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_173
Type: CAZyme
Location: 175573 - 176658 (-)
Type: CAZyme
Location: 175573 - 176658 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_174
Type: pfam
Location: 176685 - 177560 (-)
Type: pfam
Location: 176685 - 177560 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_175
Type: pfam
Location: 177575 - 178348 (-)
Type: pfam
Location: 177575 - 178348 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_176
Type: CAZyme
Location: 178387 - 179445 (-)
Type: CAZyme
Location: 178387 - 179445 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_177
Type: pfam
Location: 179519 - 180616 (-)
Type: pfam
Location: 179519 - 180616 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_178
Type: pfam
Location: 180645 - 181463 (-)
Type: pfam
Location: 180645 - 181463 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_179
Type: CAZyme
Location: 181540 - 182700 (-)
Type: CAZyme
Location: 181540 - 182700 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_180
Type: peptidase
Location: 183153 - 183797 (-)
Type: peptidase
Location: 183153 - 183797 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_181
Type: TC
Location: 183883 - 184827 (-)
Type: TC
Location: 183883 - 184827 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.