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Cluster: CokerMO_2019_SRR8692214_bin.21_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_140 157878 159284 + 2.A.66.1.33
pfam CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_141 159281 159862 + Hexapep | Mac
pfam CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_142 159872 160498 - DUF624
CAZyme CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_143 160615 162111 - GH32
TC CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_144 162128 162961 - 3.A.1.1.39
TC CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_145 162978 163847 - 3.A.1.1.11
TC CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_146 163852 165192 - 3.A.1.1.40
TF CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_147 165233 166468 - 0041905
pfam CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_148 166476 168167 - FGGY_C
CAZyme CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_149 168973 170490 - GH51_1
TC CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_150 170549 171190 - 9.B.28.1.8
CAZyme CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_151 171210 172703 - GH51_1
TC CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_152 172733 173569 - 3.A.1.1.34
TC CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_153 173572 174477 - 3.A.1.1.34
TC CokerMO_2019_SRR8692214_bin.21_k141_47394 CokerMO_2019_SRR8692214_bin.21_k141_47394_154 174601 175980 - 3.A.1.1.34
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_140
Type: TC
Location: 157878 - 159284 (+)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_141
Type: pfam
Location: 159281 - 159862 (+)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_142
Type: pfam
Location: 159872 - 160498 (-)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_143
Type: CAZyme
Location: 160615 - 162111 (-)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_144
Type: TC
Location: 162128 - 162961 (-)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_145
Type: TC
Location: 162978 - 163847 (-)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_146
Type: TC
Location: 163852 - 165192 (-)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_147
Type: TF
Location: 165233 - 166468 (-)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_148
Type: pfam
Location: 166476 - 168167 (-)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_149
Type: CAZyme
Location: 168973 - 170490 (-)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_150
Type: TC
Location: 170549 - 171190 (-)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_151
Type: CAZyme
Location: 171210 - 172703 (-)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_152
Type: TC
Location: 172733 - 173569 (-)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_153
Type: TC
Location: 173572 - 174477 (-)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_47394_154
Type: TC
Location: 174601 - 175980 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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