Cluster: CokerMO_2019_SRR8692214_bin.21_CGC12
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692214_bin.21
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692214_bin.21_k141_29448 | CokerMO_2019_SRR8692214_bin.21_k141_29448_32 | 38246 | 39385 | + | 3.A.1.12.4 |
| TC | CokerMO_2019_SRR8692214_bin.21_k141_29448 | CokerMO_2019_SRR8692214_bin.21_k141_29448_33 | 39382 | 40962 | + | 3.A.1.12.8 |
| pfam | CokerMO_2019_SRR8692214_bin.21_k141_29448 | CokerMO_2019_SRR8692214_bin.21_k141_29448_34 | 41067 | 41555 | - | DUF2798 |
| STP | CokerMO_2019_SRR8692214_bin.21_k141_29448 | CokerMO_2019_SRR8692214_bin.21_k141_29448_35 | 42310 | 43311 | + | Peripla_BP_1 |
| TC | CokerMO_2019_SRR8692214_bin.21_k141_29448 | CokerMO_2019_SRR8692214_bin.21_k141_29448_36 | 43326 | 44810 | + | 3.A.1.2.20 |
| TC | CokerMO_2019_SRR8692214_bin.21_k141_29448 | CokerMO_2019_SRR8692214_bin.21_k141_29448_37 | 44800 | 45786 | + | 3.A.1.2.11 |
| pfam | CokerMO_2019_SRR8692214_bin.21_k141_29448 | CokerMO_2019_SRR8692214_bin.21_k141_29448_38 | 45811 | 46746 | + | AP_endonuc_2 |
| CAZyme | CokerMO_2019_SRR8692214_bin.21_k141_29448 | CokerMO_2019_SRR8692214_bin.21_k141_29448_39 | 46762 | 47799 | + | GH177 |
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_29448_32
Type: TC
Location: 38246 - 39385 (+)
Type: TC
Location: 38246 - 39385 (+)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_29448_33
Type: TC
Location: 39382 - 40962 (+)
Type: TC
Location: 39382 - 40962 (+)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_29448_34
Type: pfam
Location: 41067 - 41555 (-)
Type: pfam
Location: 41067 - 41555 (-)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_29448_35
Type: STP
Location: 42310 - 43311 (+)
Type: STP
Location: 42310 - 43311 (+)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_29448_36
Type: TC
Location: 43326 - 44810 (+)
Type: TC
Location: 43326 - 44810 (+)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_29448_37
Type: TC
Location: 44800 - 45786 (+)
Type: TC
Location: 44800 - 45786 (+)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_29448_38
Type: pfam
Location: 45811 - 46746 (+)
Type: pfam
Location: 45811 - 46746 (+)
Gene ID: CokerMO_2019_SRR8692214_bin.21_k141_29448_39
Type: CAZyme
Location: 46762 - 47799 (+)
Type: CAZyme
Location: 46762 - 47799 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.