dbCAN HGM

Cluster: CokerMO_2019_SRR8692194_bin.8_CGC20

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	CokerMO_2019_SRR8692194_bin.8_k141_12103	CokerMO_2019_SRR8692194_bin.8_k141_12103_14	14653	15687	+	GT4
CAZyme	CokerMO_2019_SRR8692194_bin.8_k141_12103	CokerMO_2019_SRR8692194_bin.8_k141_12103_15	15689	17011	+	GT4
pfam	CokerMO_2019_SRR8692194_bin.8_k141_12103	CokerMO_2019_SRR8692194_bin.8_k141_12103_16	17365	19308	+	tRNA-synt_2b \| TGS \| HGTP_anticodon \| tRNA_SAD
TC	CokerMO_2019_SRR8692194_bin.8_k141_12103	CokerMO_2019_SRR8692194_bin.8_k141_12103_17	19519	20568	-	9.B.145.1.2
TF	CokerMO_2019_SRR8692194_bin.8_k141_12103	CokerMO_2019_SRR8692194_bin.8_k141_12103_18	21447	22148	+	Trans_reg_C
TC	CokerMO_2019_SRR8692194_bin.8_k141_12103	CokerMO_2019_SRR8692194_bin.8_k141_12103_19	22141	23493	+	2.A.21.9.1

Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_12103_14
Type: CAZyme
Location: 14653 - 15687 (+)

Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_12103_15
Type: CAZyme
Location: 15689 - 17011 (+)

Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_12103_16
Type: pfam
Location: 17365 - 19308 (+)

Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_12103_17
Type: TC
Location: 19519 - 20568 (-)

Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_12103_18
Type: TF
Location: 21447 - 22148 (+)

Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_12103_19
Type: TC
Location: 22141 - 23493 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
CokerMO_2019_SRR8692194_bin.8_k141_12103_17	vegan > omnivore	1.03143	0.01980
CokerMO_2019_SRR8692194_bin.8_k141_12103_17	vegetarian > omnivore	2.22684	0.00341