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Cluster: CokerMO_2019_SRR8692194_bin.8_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_9 10148 10843 + 8.A.3.2.3
TC CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_10 10856 11548 + 8.A.3.2.2
TC CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_11 11568 12944 + 9.B.18.1.2
pfam CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_12 12948 13733 + LicD
CAZyme CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_13 13781 14476 + GT26
CAZyme CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_14 14451 15536 + GT4
pfam CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_15 15533 16627 + Epimerase_2
CAZyme CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_16 16627 17592 + GT2
pfam CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_17 17648 18355 + IspD | NTP_transf_3
pfam CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_18 18357 19382 + ADH_zinc_N | ADH_N | Glu_dehyd_C
TC CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_19 19389 20807 + 2.A.66.2.16
NULL(UNKNOWN) CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_20 20947 22104 + NULL(UNKNOWN)
[View Structural Homologs]
STP CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_21 22187 23284 + Pyr_redox
CAZyme CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_22 23300 24352 + GT113
CAZyme CokerMO_2019_SRR8692194_bin.8_k141_9521 CokerMO_2019_SRR8692194_bin.8_k141_9521_23 24498 26246 + GH25
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_9
Type: TC
Location: 10148 - 10843 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_10
Type: TC
Location: 10856 - 11548 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_11
Type: TC
Location: 11568 - 12944 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_12
Type: pfam
Location: 12948 - 13733 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_13
Type: CAZyme
Location: 13781 - 14476 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_14
Type: CAZyme
Location: 14451 - 15536 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_15
Type: pfam
Location: 15533 - 16627 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_16
Type: CAZyme
Location: 16627 - 17592 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_17
Type: pfam
Location: 17648 - 18355 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_18
Type: pfam
Location: 18357 - 19382 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_19
Type: TC
Location: 19389 - 20807 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_20
Type:
Location: 20947 - 22104 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_21
Type: STP
Location: 22187 - 23284 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_22
Type: CAZyme
Location: 23300 - 24352 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_9521_23
Type: CAZyme
Location: 24498 - 26246 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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