dbCAN Logo

Cluster: CokerMO_2019_SRR8692194_bin.8_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692194_bin.8_k141_4500 CokerMO_2019_SRR8692194_bin.8_k141_4500_60 60276 62237 + 3.A.2.2.2
TC CokerMO_2019_SRR8692194_bin.8_k141_4500 CokerMO_2019_SRR8692194_bin.8_k141_4500_61 62268 62747 + 3.A.2.2.2
NULL(UNKNOWN) CokerMO_2019_SRR8692194_bin.8_k141_4500 CokerMO_2019_SRR8692194_bin.8_k141_4500_62 62817 63407 + NULL(UNKNOWN)
[View Structural Homologs]
TC CokerMO_2019_SRR8692194_bin.8_k141_4500 CokerMO_2019_SRR8692194_bin.8_k141_4500_63 63417 64436 + 3.A.2.2.2
TC CokerMO_2019_SRR8692194_bin.8_k141_4500 CokerMO_2019_SRR8692194_bin.8_k141_4500_64 64417 64737 + 3.A.2.2.2
pfam CokerMO_2019_SRR8692194_bin.8_k141_4500 CokerMO_2019_SRR8692194_bin.8_k141_4500_65 64734 65438 + Acetyltransf_1 | Acetyltransf_3
TC CokerMO_2019_SRR8692194_bin.8_k141_4500 CokerMO_2019_SRR8692194_bin.8_k141_4500_66 65472 67262 + 3.A.2.2.2
TC CokerMO_2019_SRR8692194_bin.8_k141_4500 CokerMO_2019_SRR8692194_bin.8_k141_4500_67 67249 68634 + 3.A.2.2.2
TC CokerMO_2019_SRR8692194_bin.8_k141_4500 CokerMO_2019_SRR8692194_bin.8_k141_4500_68 68638 69261 + 3.A.2.2.2
CAZyme CokerMO_2019_SRR8692194_bin.8_k141_4500 CokerMO_2019_SRR8692194_bin.8_k141_4500_69 69632 70780 + CBM50
NULL(UNKNOWN) CokerMO_2019_SRR8692194_bin.8_k141_4500 CokerMO_2019_SRR8692194_bin.8_k141_4500_70 70888 71202 - NULL(UNKNOWN)
[View Structural Homologs]
TC CokerMO_2019_SRR8692194_bin.8_k141_4500 CokerMO_2019_SRR8692194_bin.8_k141_4500_71 71251 72057 - 2.A.1.17.3
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_4500_60
Type: TC
Location: 60276 - 62237 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_4500_61
Type: TC
Location: 62268 - 62747 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_4500_62
Type:
Location: 62817 - 63407 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_4500_63
Type: TC
Location: 63417 - 64436 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_4500_64
Type: TC
Location: 64417 - 64737 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_4500_65
Type: pfam
Location: 64734 - 65438 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_4500_66
Type: TC
Location: 65472 - 67262 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_4500_67
Type: TC
Location: 67249 - 68634 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_4500_68
Type: TC
Location: 68638 - 69261 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_4500_69
Type: CAZyme
Location: 69632 - 70780 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_4500_70
Type:
Location: 70888 - 71202 (-)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_4500_71
Type: TC
Location: 71251 - 72057 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
CokerMO_2019_SRR8692194_bin.8_k141_4500_61 vegan > omnivore 1.41228 0.00918
CokerMO_2019_SRR8692194_bin.8_k141_4500_65 vegan > omnivore 2.91173 0.00918
CokerMO_2019_SRR8692194_bin.8_k141_4500_65 vegetarian > omnivore 3.13690 0.00341
CokerMO_2019_SRR8692194_bin.8_k141_4500_68 vegan > omnivore 1.76100 0.01980

🧭 Explore Read Mapping of CGC

← Back to Cluster List