Cluster: CokerMO_2019_SRR8692194_bin.8_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692194_bin.8
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692194_bin.8_k141_204 | CokerMO_2019_SRR8692194_bin.8_k141_204_9 | 9649 | 11031 | + | 2.A.38.4.3 |
| TC | CokerMO_2019_SRR8692194_bin.8_k141_204 | CokerMO_2019_SRR8692194_bin.8_k141_204_10 | 11041 | 11706 | + | 2.A.38.4.6 |
| peptidase | CokerMO_2019_SRR8692194_bin.8_k141_204 | CokerMO_2019_SRR8692194_bin.8_k141_204_11 | 11829 | 12587 | + | G05.UPW |
| CAZyme | CokerMO_2019_SRR8692194_bin.8_k141_204 | CokerMO_2019_SRR8692194_bin.8_k141_204_12 | 12735 | 14966 | + | GH31_15 |
| CAZyme | CokerMO_2019_SRR8692194_bin.8_k141_204 | CokerMO_2019_SRR8692194_bin.8_k141_204_13 | 15036 | 16643 | + | GH13_31 |
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_204_9
Type: TC
Location: 9649 - 11031 (+)
Type: TC
Location: 9649 - 11031 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_204_10
Type: TC
Location: 11041 - 11706 (+)
Type: TC
Location: 11041 - 11706 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_204_11
Type: peptidase
Location: 11829 - 12587 (+)
Type: peptidase
Location: 11829 - 12587 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_204_12
Type: CAZyme
Location: 12735 - 14966 (+)
Type: CAZyme
Location: 12735 - 14966 (+)
Gene ID: CokerMO_2019_SRR8692194_bin.8_k141_204_13
Type: CAZyme
Location: 15036 - 16643 (+)
Type: CAZyme
Location: 15036 - 16643 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.