dbCAN HGM

Cluster: CokerMO_2019_SRR8692192_bin.4_CGC10

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	CokerMO_2019_SRR8692192_bin.4_k141_7963	CokerMO_2019_SRR8692192_bin.4_k141_7963_47	48592	49518	-	CE7
TC	CokerMO_2019_SRR8692192_bin.4_k141_7963	CokerMO_2019_SRR8692192_bin.4_k141_7963_48	49650	50477	-	3.A.1.5.27
TC	CokerMO_2019_SRR8692192_bin.4_k141_7963	CokerMO_2019_SRR8692192_bin.4_k141_7963_49	50478	52493	-	3.A.1.5.25
TC	CokerMO_2019_SRR8692192_bin.4_k141_7963	CokerMO_2019_SRR8692192_bin.4_k141_7963_50	52497	53453	-	3.A.1.5.38
TC	CokerMO_2019_SRR8692192_bin.4_k141_7963	CokerMO_2019_SRR8692192_bin.4_k141_7963_51	53609	55222	-	3.A.1.5.27
pfam	CokerMO_2019_SRR8692192_bin.4_k141_7963	CokerMO_2019_SRR8692192_bin.4_k141_7963_52	55588	57528	-	GIY-YIG \| UVR \| UvrC_RNaseH_dom \| HHH_2 \| HHH_5 \| UvrC_RNaseH
TC	CokerMO_2019_SRR8692192_bin.4_k141_7963	CokerMO_2019_SRR8692192_bin.4_k141_7963_53	57535	59217	-	2.A.66.4.4

Gene ID: CokerMO_2019_SRR8692192_bin.4_k141_7963_47
Type: CAZyme
Location: 48592 - 49518 (-)

Gene ID: CokerMO_2019_SRR8692192_bin.4_k141_7963_48
Type: TC
Location: 49650 - 50477 (-)

Gene ID: CokerMO_2019_SRR8692192_bin.4_k141_7963_49
Type: TC
Location: 50478 - 52493 (-)

Gene ID: CokerMO_2019_SRR8692192_bin.4_k141_7963_50
Type: TC
Location: 52497 - 53453 (-)

Gene ID: CokerMO_2019_SRR8692192_bin.4_k141_7963_51
Type: TC
Location: 53609 - 55222 (-)

Gene ID: CokerMO_2019_SRR8692192_bin.4_k141_7963_52
Type: pfam
Location: 55588 - 57528 (-)

Gene ID: CokerMO_2019_SRR8692192_bin.4_k141_7963_53
Type: TC
Location: 57535 - 59217 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.