Cluster: CokerMO_2019_SRR8692191_bin.3_CGC9
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692191_bin.3
- CGC Family ID: CGCFAM_00029
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692191_bin.3_k141_5529 | CokerMO_2019_SRR8692191_bin.3_k141_5529_44 | 41348 | 42742 | + | 9.B.18.1.3 |
| TC | CokerMO_2019_SRR8692191_bin.3_k141_5529 | CokerMO_2019_SRR8692191_bin.3_k141_5529_45 | 42811 | 44718 | + | 9.B.18.2.1 |
| pfam | CokerMO_2019_SRR8692191_bin.3_k141_5529 | CokerMO_2019_SRR8692191_bin.3_k141_5529_46 | 44720 | 45919 | + | Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP |
| TC | CokerMO_2019_SRR8692191_bin.3_k141_5529 | CokerMO_2019_SRR8692191_bin.3_k141_5529_47 | 45935 | 46618 | + | 9.B.18.1.2 |
| pfam | CokerMO_2019_SRR8692191_bin.3_k141_5529 | CokerMO_2019_SRR8692191_bin.3_k141_5529_48 | 46743 | 47843 | + | Epimerase_2 |
| CAZyme | CokerMO_2019_SRR8692191_bin.3_k141_5529 | CokerMO_2019_SRR8692191_bin.3_k141_5529_49 | 47856 | 48983 | + | GT4 |
| STP | CokerMO_2019_SRR8692191_bin.3_k141_5529 | CokerMO_2019_SRR8692191_bin.3_k141_5529_50 | 49004 | 50161 | + | Aminotran_1_2 |
| CAZyme | CokerMO_2019_SRR8692191_bin.3_k141_5529 | CokerMO_2019_SRR8692191_bin.3_k141_5529_51 | 50566 | 51807 | + | GT4 |
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5529_44
Type: TC
Location: 41348 - 42742 (+)
Type: TC
Location: 41348 - 42742 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5529_45
Type: TC
Location: 42811 - 44718 (+)
Type: TC
Location: 42811 - 44718 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5529_46
Type: pfam
Location: 44720 - 45919 (+)
Type: pfam
Location: 44720 - 45919 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5529_47
Type: TC
Location: 45935 - 46618 (+)
Type: TC
Location: 45935 - 46618 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5529_48
Type: pfam
Location: 46743 - 47843 (+)
Type: pfam
Location: 46743 - 47843 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5529_49
Type: CAZyme
Location: 47856 - 48983 (+)
Type: CAZyme
Location: 47856 - 48983 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5529_50
Type: STP
Location: 49004 - 50161 (+)
Type: STP
Location: 49004 - 50161 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5529_51
Type: CAZyme
Location: 50566 - 51807 (+)
Type: CAZyme
Location: 50566 - 51807 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Massilistercora
Species
Massilistercora sp902406105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.