Cluster: CokerMO_2019_SRR8692191_bin.3_CGC6
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692191_bin.3
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692191_bin.3_k141_5153 | CokerMO_2019_SRR8692191_bin.3_k141_5153_13 | 13270 | 14067 | + | 3.A.1.3.14 |
| TC | CokerMO_2019_SRR8692191_bin.3_k141_5153 | CokerMO_2019_SRR8692191_bin.3_k141_5153_14 | 14082 | 17183 | + | 1.A.23.3.1 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692191_bin.3_k141_5153 | CokerMO_2019_SRR8692191_bin.3_k141_5153_15 | 17140 | 17280 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | CokerMO_2019_SRR8692191_bin.3_k141_5153 | CokerMO_2019_SRR8692191_bin.3_k141_5153_16 | 17262 | 19067 | - | M24.UPB |
| CAZyme | CokerMO_2019_SRR8692191_bin.3_k141_5153 | CokerMO_2019_SRR8692191_bin.3_k141_5153_17 | 19119 | 21347 | - | GH36 |
| TC | CokerMO_2019_SRR8692191_bin.3_k141_5153 | CokerMO_2019_SRR8692191_bin.3_k141_5153_18 | 21558 | 23441 | + | 3.A.3.6.16 |
| pfam | CokerMO_2019_SRR8692191_bin.3_k141_5153 | CokerMO_2019_SRR8692191_bin.3_k141_5153_19 | 23498 | 23773 | - | Trns_repr_metal |
| TC | CokerMO_2019_SRR8692191_bin.3_k141_5153 | CokerMO_2019_SRR8692191_bin.3_k141_5153_20 | 24160 | 24678 | + | 2.A.22.5.2 |
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5153_13
Type: TC
Location: 13270 - 14067 (+)
Type: TC
Location: 13270 - 14067 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5153_14
Type: TC
Location: 14082 - 17183 (+)
Type: TC
Location: 14082 - 17183 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5153_15
Type:
Location: 17140 - 17280 (+)
Type:
Location: 17140 - 17280 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5153_16
Type: peptidase
Location: 17262 - 19067 (-)
Type: peptidase
Location: 17262 - 19067 (-)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5153_17
Type: CAZyme
Location: 19119 - 21347 (-)
Type: CAZyme
Location: 19119 - 21347 (-)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5153_18
Type: TC
Location: 21558 - 23441 (+)
Type: TC
Location: 21558 - 23441 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5153_19
Type: pfam
Location: 23498 - 23773 (-)
Type: pfam
Location: 23498 - 23773 (-)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_5153_20
Type: TC
Location: 24160 - 24678 (+)
Type: TC
Location: 24160 - 24678 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Massilistercora
Species
Massilistercora sp902406105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.