Cluster: CokerMO_2019_SRR8692191_bin.3_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692191_bin.3
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692191_bin.3_k141_4082 | CokerMO_2019_SRR8692191_bin.3_k141_4082_5 | 3208 | 5166 | + | 4.A.1.2.13 |
| CAZyme | CokerMO_2019_SRR8692191_bin.3_k141_4082 | CokerMO_2019_SRR8692191_bin.3_k141_4082_6 | 5179 | 6831 | + | GH13_29 |
| STP | CokerMO_2019_SRR8692191_bin.3_k141_4082 | CokerMO_2019_SRR8692191_bin.3_k141_4082_7 | 6925 | 7182 | + | PTS-HPr |
| TC | CokerMO_2019_SRR8692191_bin.3_k141_4082 | CokerMO_2019_SRR8692191_bin.3_k141_4082_8 | 7214 | 8839 | + | 8.A.7.1.1 |
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_4082_5
Type: TC
Location: 3208 - 5166 (+)
Type: TC
Location: 3208 - 5166 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_4082_6
Type: CAZyme
Location: 5179 - 6831 (+)
Type: CAZyme
Location: 5179 - 6831 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_4082_7
Type: STP
Location: 6925 - 7182 (+)
Type: STP
Location: 6925 - 7182 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_4082_8
Type: TC
Location: 7214 - 8839 (+)
Type: TC
Location: 7214 - 8839 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Massilistercora
Species
Massilistercora sp902406105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.