Cluster: CokerMO_2019_SRR8692191_bin.3_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692191_bin.3
- CGC Family ID: CGCFAM_09250
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692191_bin.3_k141_2067 | CokerMO_2019_SRR8692191_bin.3_k141_2067_7 | 3781 | 4227 | + | 3.A.7.19.1 |
| pfam | CokerMO_2019_SRR8692191_bin.3_k141_2067 | CokerMO_2019_SRR8692191_bin.3_k141_2067_8 | 4242 | 4508 | + | Ribosomal_S18 |
| pfam | CokerMO_2019_SRR8692191_bin.3_k141_2067 | CokerMO_2019_SRR8692191_bin.3_k141_2067_9 | 4686 | 5492 | + | Lactamase_B | Lactamase_B_2 |
| CAZyme | CokerMO_2019_SRR8692191_bin.3_k141_2067 | CokerMO_2019_SRR8692191_bin.3_k141_2067_10 | 5544 | 7700 | - | GH112 |
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_2067_7
Type: TC
Location: 3781 - 4227 (+)
Type: TC
Location: 3781 - 4227 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_2067_8
Type: pfam
Location: 4242 - 4508 (+)
Type: pfam
Location: 4242 - 4508 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_2067_9
Type: pfam
Location: 4686 - 5492 (+)
Type: pfam
Location: 4686 - 5492 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_2067_10
Type: CAZyme
Location: 5544 - 7700 (-)
Type: CAZyme
Location: 5544 - 7700 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Massilistercora
Species
Massilistercora sp902406105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.