Cluster: CokerMO_2019_SRR8692191_bin.3_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692191_bin.3
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692191_bin.3_k141_10800 | CokerMO_2019_SRR8692191_bin.3_k141_10800_3 | 1560 | 2576 | + | GT2 |
| pfam | CokerMO_2019_SRR8692191_bin.3_k141_10800 | CokerMO_2019_SRR8692191_bin.3_k141_10800_4 | 2647 | 3261 | + | Ferritin | Rubrerythrin | Rubrerythrin | RUBY_RBDX |
| peptidase | CokerMO_2019_SRR8692191_bin.3_k141_10800 | CokerMO_2019_SRR8692191_bin.3_k141_10800_5 | 3273 | 4979 | + | S08.UPA |
| TC | CokerMO_2019_SRR8692191_bin.3_k141_10800 | CokerMO_2019_SRR8692191_bin.3_k141_10800_6 | 5148 | 5771 | + | 3.A.1.28.1 |
| pfam | CokerMO_2019_SRR8692191_bin.3_k141_10800 | CokerMO_2019_SRR8692191_bin.3_k141_10800_7 | 5843 | 6640 | + | CbiQ |
| TC | CokerMO_2019_SRR8692191_bin.3_k141_10800 | CokerMO_2019_SRR8692191_bin.3_k141_10800_8 | 6625 | 7470 | + | 3.A.1.23.2 |
| TC | CokerMO_2019_SRR8692191_bin.3_k141_10800 | CokerMO_2019_SRR8692191_bin.3_k141_10800_9 | 7483 | 8304 | + | 3.A.1.33.1 |
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_10800_3
Type: CAZyme
Location: 1560 - 2576 (+)
Type: CAZyme
Location: 1560 - 2576 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_10800_4
Type: pfam
Location: 2647 - 3261 (+)
Type: pfam
Location: 2647 - 3261 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_10800_5
Type: peptidase
Location: 3273 - 4979 (+)
Type: peptidase
Location: 3273 - 4979 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_10800_6
Type: TC
Location: 5148 - 5771 (+)
Type: TC
Location: 5148 - 5771 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_10800_7
Type: pfam
Location: 5843 - 6640 (+)
Type: pfam
Location: 5843 - 6640 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_10800_8
Type: TC
Location: 6625 - 7470 (+)
Type: TC
Location: 6625 - 7470 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_10800_9
Type: TC
Location: 7483 - 8304 (+)
Type: TC
Location: 7483 - 8304 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Massilistercora
Species
Massilistercora sp902406105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.