Cluster: CokerMO_2019_SRR8692191_bin.3_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692191_bin.3
- CGC Family ID: CGCFAM_00700
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692191_bin.3_k141_9917 | CokerMO_2019_SRR8692191_bin.3_k141_9917_12 | 13876 | 16158 | + | GT35 |
| pfam | CokerMO_2019_SRR8692191_bin.3_k141_9917 | CokerMO_2019_SRR8692191_bin.3_k141_9917_13 | 16402 | 18654 | + | Gly_radical | PFL-like |
| pfam | CokerMO_2019_SRR8692191_bin.3_k141_9917 | CokerMO_2019_SRR8692191_bin.3_k141_9917_14 | 18695 | 19417 | + | Radical_SAM | Fer4_12 |
| TC | CokerMO_2019_SRR8692191_bin.3_k141_9917 | CokerMO_2019_SRR8692191_bin.3_k141_9917_15 | 19514 | 21856 | + | 9.A.8.1.5 |
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_9917_12
Type: CAZyme
Location: 13876 - 16158 (+)
Type: CAZyme
Location: 13876 - 16158 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_9917_13
Type: pfam
Location: 16402 - 18654 (+)
Type: pfam
Location: 16402 - 18654 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_9917_14
Type: pfam
Location: 18695 - 19417 (+)
Type: pfam
Location: 18695 - 19417 (+)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_9917_15
Type: TC
Location: 19514 - 21856 (+)
Type: TC
Location: 19514 - 21856 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Massilistercora
Species
Massilistercora sp902406105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.