Cluster: CokerMO_2019_SRR8692191_bin.3_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CokerMO_2019_SRR8692191_bin.3
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692191_bin.3_k141_9825 | CokerMO_2019_SRR8692191_bin.3_k141_9825_2 | 706 | 2535 | - | GH13_4 |
| CAZyme | CokerMO_2019_SRR8692191_bin.3_k141_9825 | CokerMO_2019_SRR8692191_bin.3_k141_9825_3 | 2599 | 4773 | - | GH36 |
| TC | CokerMO_2019_SRR8692191_bin.3_k141_9825 | CokerMO_2019_SRR8692191_bin.3_k141_9825_4 | 4808 | 5650 | - | 3.A.1.1.28 |
| TC | CokerMO_2019_SRR8692191_bin.3_k141_9825 | CokerMO_2019_SRR8692191_bin.3_k141_9825_5 | 5650 | 6516 | - | 3.A.1.1.28 |
| TC | CokerMO_2019_SRR8692191_bin.3_k141_9825 | CokerMO_2019_SRR8692191_bin.3_k141_9825_6 | 6535 | 7821 | - | 3.A.1.1.28 |
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_9825_2
Type: CAZyme
Location: 706 - 2535 (-)
Type: CAZyme
Location: 706 - 2535 (-)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_9825_3
Type: CAZyme
Location: 2599 - 4773 (-)
Type: CAZyme
Location: 2599 - 4773 (-)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_9825_4
Type: TC
Location: 4808 - 5650 (-)
Type: TC
Location: 4808 - 5650 (-)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_9825_5
Type: TC
Location: 5650 - 6516 (-)
Type: TC
Location: 5650 - 6516 (-)
Gene ID: CokerMO_2019_SRR8692191_bin.3_k141_9825_6
Type: TC
Location: 6535 - 7821 (-)
Type: TC
Location: 6535 - 7821 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Massilistercora
Species
Massilistercora sp902406105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.