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Cluster: ChuDM_2017_SRR8942429_bin.10_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942429_bin.10_k119_15507 ChuDM_2017_SRR8942429_bin.10_k119_15507_4 4128 5549 - GH1
TC ChuDM_2017_SRR8942429_bin.10_k119_15507 ChuDM_2017_SRR8942429_bin.10_k119_15507_5 5625 7403 - 4.A.3.1.1
TF ChuDM_2017_SRR8942429_bin.10_k119_15507 ChuDM_2017_SRR8942429_bin.10_k119_15507_6 7679 8689 + LacI
CAZyme ChuDM_2017_SRR8942429_bin.10_k119_15507 ChuDM_2017_SRR8942429_bin.10_k119_15507_7 9040 10479 - GH1
TC ChuDM_2017_SRR8942429_bin.10_k119_15507 ChuDM_2017_SRR8942429_bin.10_k119_15507_8 10546 12321 - 4.A.3.1.1
TF ChuDM_2017_SRR8942429_bin.10_k119_15507 ChuDM_2017_SRR8942429_bin.10_k119_15507_9 12679 13683 + LacI
TC ChuDM_2017_SRR8942429_bin.10_k119_15507 ChuDM_2017_SRR8942429_bin.10_k119_15507_10 13898 14236 + 4.A.3.1.2
Gene ID: ChuDM_2017_SRR8942429_bin.10_k119_15507_4
Type: CAZyme
Location: 4128 - 5549 (-)
Gene ID: ChuDM_2017_SRR8942429_bin.10_k119_15507_5
Type: TC
Location: 5625 - 7403 (-)
Gene ID: ChuDM_2017_SRR8942429_bin.10_k119_15507_6
Type: TF
Location: 7679 - 8689 (+)
Gene ID: ChuDM_2017_SRR8942429_bin.10_k119_15507_7
Type: CAZyme
Location: 9040 - 10479 (-)
Gene ID: ChuDM_2017_SRR8942429_bin.10_k119_15507_8
Type: TC
Location: 10546 - 12321 (-)
Gene ID: ChuDM_2017_SRR8942429_bin.10_k119_15507_9
Type: TF
Location: 12679 - 13683 (+)
Gene ID: ChuDM_2017_SRR8942429_bin.10_k119_15507_10
Type: TC
Location: 13898 - 14236 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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