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Cluster: ChuDM_2017_SRR8942429_bin.10_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942429_bin.10_k119_18578 ChuDM_2017_SRR8942429_bin.10_k119_18578_21 22890 24290 + GH1
TC ChuDM_2017_SRR8942429_bin.10_k119_18578 ChuDM_2017_SRR8942429_bin.10_k119_18578_22 24426 25778 + 4.A.3.2.2
TC ChuDM_2017_SRR8942429_bin.10_k119_18578 ChuDM_2017_SRR8942429_bin.10_k119_18578_23 25931 26233 + 4.A.3.2.9
TC ChuDM_2017_SRR8942429_bin.10_k119_18578 ChuDM_2017_SRR8942429_bin.10_k119_18578_24 26243 26575 + 4.A.3.2.3
pfam ChuDM_2017_SRR8942429_bin.10_k119_18578 ChuDM_2017_SRR8942429_bin.10_k119_18578_25 26819 27772 + ROK
pfam ChuDM_2017_SRR8942429_bin.10_k119_18578 ChuDM_2017_SRR8942429_bin.10_k119_18578_26 27939 28862 + DHH | DHHA2
TC ChuDM_2017_SRR8942429_bin.10_k119_18578 ChuDM_2017_SRR8942429_bin.10_k119_18578_27 29130 30488 + 2.A.33.1.1
Gene ID: ChuDM_2017_SRR8942429_bin.10_k119_18578_21
Type: CAZyme
Location: 22890 - 24290 (+)
Gene ID: ChuDM_2017_SRR8942429_bin.10_k119_18578_22
Type: TC
Location: 24426 - 25778 (+)
Gene ID: ChuDM_2017_SRR8942429_bin.10_k119_18578_23
Type: TC
Location: 25931 - 26233 (+)
Gene ID: ChuDM_2017_SRR8942429_bin.10_k119_18578_24
Type: TC
Location: 26243 - 26575 (+)
Gene ID: ChuDM_2017_SRR8942429_bin.10_k119_18578_25
Type: pfam
Location: 26819 - 27772 (+)
Gene ID: ChuDM_2017_SRR8942429_bin.10_k119_18578_26
Type: pfam
Location: 27939 - 28862 (+)
Gene ID: ChuDM_2017_SRR8942429_bin.10_k119_18578_27
Type: TC
Location: 29130 - 30488 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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