dbCAN HGM

Cluster: ChuDM_2017_SRR8942399_bin.18_CGC20

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	ChuDM_2017_SRR8942399_bin.18_k119_16437	ChuDM_2017_SRR8942399_bin.18_k119_16437_10	11160	11633	+	4.A.6.1.18
TC	ChuDM_2017_SRR8942399_bin.18_k119_16437	ChuDM_2017_SRR8942399_bin.18_k119_16437_11	11643	12428	+	4.A.6.1.13
TC	ChuDM_2017_SRR8942399_bin.18_k119_16437	ChuDM_2017_SRR8942399_bin.18_k119_16437_12	12431	13261	+	4.A.6.1.13
pfam	ChuDM_2017_SRR8942399_bin.18_k119_16437	ChuDM_2017_SRR8942399_bin.18_k119_16437_13	13288	13686	+	EIIA-man
CAZyme	ChuDM_2017_SRR8942399_bin.18_k119_16437	ChuDM_2017_SRR8942399_bin.18_k119_16437_14	13699	14823	+	GH172

Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_16437_10
Type: TC
Location: 11160 - 11633 (+)

Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_16437_11
Type: TC
Location: 11643 - 12428 (+)

Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_16437_12
Type: TC
Location: 12431 - 13261 (+)

Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_16437_13
Type: pfam
Location: 13288 - 13686 (+)

Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_16437_14
Type: CAZyme
Location: 13699 - 14823 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
ChuDM_2017_SRR8942399_bin.18_k119_16437_10	vegan > omnivore	1.11171	0.00933
ChuDM_2017_SRR8942399_bin.18_k119_16437_14	vegan > omnivore	1.02498	0.00933