dbCAN Logo

Cluster: ChuDM_2017_SRR8942399_bin.18_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942399_bin.18_k119_1544 ChuDM_2017_SRR8942399_bin.18_k119_1544_70 83796 85217 - GH1
TC ChuDM_2017_SRR8942399_bin.18_k119_1544 ChuDM_2017_SRR8942399_bin.18_k119_1544_71 85293 87071 - 4.A.3.1.1
TF ChuDM_2017_SRR8942399_bin.18_k119_1544 ChuDM_2017_SRR8942399_bin.18_k119_1544_72 87356 88357 + LacI
CAZyme ChuDM_2017_SRR8942399_bin.18_k119_1544 ChuDM_2017_SRR8942399_bin.18_k119_1544_73 88612 90051 - GH1
TC ChuDM_2017_SRR8942399_bin.18_k119_1544 ChuDM_2017_SRR8942399_bin.18_k119_1544_74 90118 91884 - 4.A.3.1.1
TF ChuDM_2017_SRR8942399_bin.18_k119_1544 ChuDM_2017_SRR8942399_bin.18_k119_1544_75 92191 93246 + LacI
TC ChuDM_2017_SRR8942399_bin.18_k119_1544 ChuDM_2017_SRR8942399_bin.18_k119_1544_76 93461 93799 + 4.A.3.1.2
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_1544_70
Type: CAZyme
Location: 83796 - 85217 (-)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_1544_71
Type: TC
Location: 85293 - 87071 (-)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_1544_72
Type: TF
Location: 87356 - 88357 (+)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_1544_73
Type: CAZyme
Location: 88612 - 90051 (-)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_1544_74
Type: TC
Location: 90118 - 91884 (-)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_1544_75
Type: TF
Location: 92191 - 93246 (+)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_1544_76
Type: TC
Location: 93461 - 93799 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List