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Cluster: ChuDM_2017_SRR8942399_bin.18_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942399_bin.18_k119_9723 ChuDM_2017_SRR8942399_bin.18_k119_9723_42 55531 58539 + GH2
NULL(UNKNOWN) ChuDM_2017_SRR8942399_bin.18_k119_9723 ChuDM_2017_SRR8942399_bin.18_k119_9723_43 58543 58998 + NULL(UNKNOWN)
[View Structural Homologs]
TC ChuDM_2017_SRR8942399_bin.18_k119_9723 ChuDM_2017_SRR8942399_bin.18_k119_9723_44 59152 60615 + 2.A.3.7.4
STP ChuDM_2017_SRR8942399_bin.18_k119_9723 ChuDM_2017_SRR8942399_bin.18_k119_9723_45 61038 61286 + PTS-HPr
STP ChuDM_2017_SRR8942399_bin.18_k119_9723 ChuDM_2017_SRR8942399_bin.18_k119_9723_46 61475 61717 + FeoA
TC ChuDM_2017_SRR8942399_bin.18_k119_9723 ChuDM_2017_SRR8942399_bin.18_k119_9723_47 61757 61978 + 9.A.8.1.6
TC ChuDM_2017_SRR8942399_bin.18_k119_9723 ChuDM_2017_SRR8942399_bin.18_k119_9723_48 62102 64429 + 9.A.8.1.6
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_9723_42
Type: CAZyme
Location: 55531 - 58539 (+)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_9723_43
Type:
Location: 58543 - 58998 (+)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_9723_44
Type: TC
Location: 59152 - 60615 (+)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_9723_45
Type: STP
Location: 61038 - 61286 (+)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_9723_46
Type: STP
Location: 61475 - 61717 (+)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_9723_47
Type: TC
Location: 61757 - 61978 (+)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_9723_48
Type: TC
Location: 62102 - 64429 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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