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Cluster: ChuDM_2017_SRR8942399_bin.18_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942399_bin.18_k119_3724 ChuDM_2017_SRR8942399_bin.18_k119_3724_165 215772 218540 - 3.A.3.4.1
STP ChuDM_2017_SRR8942399_bin.18_k119_3724 ChuDM_2017_SRR8942399_bin.18_k119_3724_166 218979 219662 + Pribosyltran
TF ChuDM_2017_SRR8942399_bin.18_k119_3724 ChuDM_2017_SRR8942399_bin.18_k119_3724_167 219972 220826 - HTH_6
CAZyme ChuDM_2017_SRR8942399_bin.18_k119_3724 ChuDM_2017_SRR8942399_bin.18_k119_3724_168 220869 223469 - GH106
TF ChuDM_2017_SRR8942399_bin.18_k119_3724 ChuDM_2017_SRR8942399_bin.18_k119_3724_169 223586 224593 + HTH_AraC
CAZyme ChuDM_2017_SRR8942399_bin.18_k119_3724 ChuDM_2017_SRR8942399_bin.18_k119_3724_170 224766 226214 + GH1
TC ChuDM_2017_SRR8942399_bin.18_k119_3724 ChuDM_2017_SRR8942399_bin.18_k119_3724_171 226494 227030 + 4.A.1.2.6
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_3724_165
Type: TC
Location: 215772 - 218540 (-)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_3724_166
Type: STP
Location: 218979 - 219662 (+)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_3724_167
Type: TF
Location: 219972 - 220826 (-)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_3724_168
Type: CAZyme
Location: 220869 - 223469 (-)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_3724_169
Type: TF
Location: 223586 - 224593 (+)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_3724_170
Type: CAZyme
Location: 224766 - 226214 (+)
Gene ID: ChuDM_2017_SRR8942399_bin.18_k119_3724_171
Type: TC
Location: 226494 - 227030 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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