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Cluster: ChuDM_2017_SRR8942396_bin.6_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_17 11373 12806 - GH31_4
pfam ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_18 12912 13886 - Glyco_hydro_31_2nd | Gal_mutarotas_2
pfam ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_19 14217 14981 + Gal_mutarotas_2
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_20 14978 16687 + GH31_4
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_21 16869 18803 + GH97
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_22 18820 20184 + CBM6 | GH43_29
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_23 20251 21351 + GH43_29
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_24 21373 22224 + CE6
TF ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_25 22367 26278 + HTH_AraC
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_26 26639 29053 + GH95
TC ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_27 29154 32267 + 1.B.14.6.1
pfam ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_28 32302 34113 + SusD_RagB | SusD-like_3
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_29 34216 35496 + GH8
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_30 35525 36673 + CE1
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_31 36750 38459 + CBM91 | GH43_12
TC ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_32 38528 39925 + 2.A.2.3.2
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_34865 ChuDM_2017_SRR8942396_bin.6_k119_34865_33 39965 41110 + GH10
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_17
Type: CAZyme
Location: 11373 - 12806 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_18
Type: pfam
Location: 12912 - 13886 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_19
Type: pfam
Location: 14217 - 14981 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_20
Type: CAZyme
Location: 14978 - 16687 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_21
Type: CAZyme
Location: 16869 - 18803 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_22
Type: CAZyme
Location: 18820 - 20184 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_23
Type: CAZyme
Location: 20251 - 21351 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_24
Type: CAZyme
Location: 21373 - 22224 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_25
Type: TF
Location: 22367 - 26278 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_26
Type: CAZyme
Location: 26639 - 29053 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_27
Type: TC
Location: 29154 - 32267 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_28
Type: pfam
Location: 32302 - 34113 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_29
Type: CAZyme
Location: 34216 - 35496 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_30
Type: CAZyme
Location: 35525 - 36673 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_31
Type: CAZyme
Location: 36750 - 38459 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_32
Type: TC
Location: 38528 - 39925 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_34865_33
Type: CAZyme
Location: 39965 - 41110 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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