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Cluster: ChuDM_2017_SRR8942396_bin.6_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_32693 ChuDM_2017_SRR8942396_bin.6_k119_32693_29 36246 37535 - GH177
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_32693 ChuDM_2017_SRR8942396_bin.6_k119_32693_30 37807 39003 - GH105
TC ChuDM_2017_SRR8942396_bin.6_k119_32693 ChuDM_2017_SRR8942396_bin.6_k119_32693_31 39210 41225 - 8.A.46.1.1
TC ChuDM_2017_SRR8942396_bin.6_k119_32693 ChuDM_2017_SRR8942396_bin.6_k119_32693_32 41237 44488 - 1.B.14.6.1
sulfatase ChuDM_2017_SRR8942396_bin.6_k119_32693 ChuDM_2017_SRR8942396_bin.6_k119_32693_33 44777 45940 - S1_22
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_32693 ChuDM_2017_SRR8942396_bin.6_k119_32693_34 45943 47757 - GH2
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_32693 ChuDM_2017_SRR8942396_bin.6_k119_32693_35 47783 48796 - GH43_3
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_32693 ChuDM_2017_SRR8942396_bin.6_k119_32693_36 48806 50824 - GH182
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_32693 ChuDM_2017_SRR8942396_bin.6_k119_32693_37 50923 51885 - GH43_31
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32693_29
Type: CAZyme
Location: 36246 - 37535 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32693_30
Type: CAZyme
Location: 37807 - 39003 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32693_31
Type: TC
Location: 39210 - 41225 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32693_32
Type: TC
Location: 41237 - 44488 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32693_33
Type: sulfatase
Location: 44777 - 45940 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32693_34
Type: CAZyme
Location: 45943 - 47757 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32693_35
Type: CAZyme
Location: 47783 - 48796 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32693_36
Type: CAZyme
Location: 48806 - 50824 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32693_37
Type: CAZyme
Location: 50923 - 51885 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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