Cluster: ChuDM_2017_SRR8942396_bin.6_CGC47
🧬 Cluster Details
- Gene Count: 26
- CAZyme Count: 15
- Substrate:
- Genome ID: ChuDM_2017_SRR8942396_bin.6
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_4 | 1804 | 3156 | + | 2.A.66.1.37 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_5 | 3374 | 5299 | - | GH13_46 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_6 | 5311 | 7524 | - | GH97 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_7 | 7592 | 8674 | - | SusE | SusF_SusE |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_8 | 8687 | 10414 | - | 8.A.46.1.1 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_9 | 10473 | 13514 | - | 1.B.14.6.1 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_10 | 13698 | 15338 | - | DUF6377 |
| sulfatase | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_11 | 15539 | 17077 | - | S1_15 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_12 | 17298 | 19217 | - | CE20 | CE20 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_13 | 19450 | 21975 | - | GH2 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_14 | 21985 | 23715 | - | GH5_4 |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_15 | 23794 | 25734 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_16 | 25756 | 27384 | - | 8.A.46.1.2 |
| peptidase | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_17 | 27408 | 30581 | - | I39.UPW |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_18 | 30625 | 33453 | - | GH31_4 |
| TF | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_19 | 33671 | 37801 | + | HTH_AraC |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_20 | 37932 | 40094 | + | GH3 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_21 | 40179 | 42380 | + | GH3 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_22 | 42388 | 43971 | + | CBM91 | GH43_12 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_23 | 44146 | 46365 | - | GH3 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_24 | 46406 | 47179 | - | BetaGal_ABD_1 | BetaGal_gal-bd |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_25 | 47310 | 50036 | - | GH2 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_26 | 50055 | 51326 | - | CE15 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_27 | 51337 | 52545 | - | GH88 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_28 | 52569 | 54356 | - | GH2 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_32011 | ChuDM_2017_SRR8942396_bin.6_k119_32011_29 | 54383 | 55663 | - | CE7 |
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_4
Type: TC
Location: 1804 - 3156 (+)
Type: TC
Location: 1804 - 3156 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_5
Type: CAZyme
Location: 3374 - 5299 (-)
Type: CAZyme
Location: 3374 - 5299 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_6
Type: CAZyme
Location: 5311 - 7524 (-)
Type: CAZyme
Location: 5311 - 7524 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_7
Type: pfam
Location: 7592 - 8674 (-)
Type: pfam
Location: 7592 - 8674 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_8
Type: TC
Location: 8687 - 10414 (-)
Type: TC
Location: 8687 - 10414 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_9
Type: TC
Location: 10473 - 13514 (-)
Type: TC
Location: 10473 - 13514 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_10
Type: pfam
Location: 13698 - 15338 (-)
Type: pfam
Location: 13698 - 15338 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_11
Type: sulfatase
Location: 15539 - 17077 (-)
Type: sulfatase
Location: 15539 - 17077 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_12
Type: CAZyme
Location: 17298 - 19217 (-)
Type: CAZyme
Location: 17298 - 19217 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_13
Type: CAZyme
Location: 19450 - 21975 (-)
Type: CAZyme
Location: 19450 - 21975 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_14
Type: CAZyme
Location: 21985 - 23715 (-)
Type: CAZyme
Location: 21985 - 23715 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_15
Type:
Location: 23794 - 25734 (-)
Type:
Location: 23794 - 25734 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_16
Type: TC
Location: 25756 - 27384 (-)
Type: TC
Location: 25756 - 27384 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_17
Type: peptidase
Location: 27408 - 30581 (-)
Type: peptidase
Location: 27408 - 30581 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_18
Type: CAZyme
Location: 30625 - 33453 (-)
Type: CAZyme
Location: 30625 - 33453 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_19
Type: TF
Location: 33671 - 37801 (+)
Type: TF
Location: 33671 - 37801 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_20
Type: CAZyme
Location: 37932 - 40094 (+)
Type: CAZyme
Location: 37932 - 40094 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_21
Type: CAZyme
Location: 40179 - 42380 (+)
Type: CAZyme
Location: 40179 - 42380 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_22
Type: CAZyme
Location: 42388 - 43971 (+)
Type: CAZyme
Location: 42388 - 43971 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_23
Type: CAZyme
Location: 44146 - 46365 (-)
Type: CAZyme
Location: 44146 - 46365 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_24
Type: pfam
Location: 46406 - 47179 (-)
Type: pfam
Location: 46406 - 47179 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_25
Type: CAZyme
Location: 47310 - 50036 (-)
Type: CAZyme
Location: 47310 - 50036 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_26
Type: CAZyme
Location: 50055 - 51326 (-)
Type: CAZyme
Location: 50055 - 51326 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_27
Type: CAZyme
Location: 51337 - 52545 (-)
Type: CAZyme
Location: 51337 - 52545 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_28
Type: CAZyme
Location: 52569 - 54356 (-)
Type: CAZyme
Location: 52569 - 54356 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_32011_29
Type: CAZyme
Location: 54383 - 55663 (-)
Type: CAZyme
Location: 54383 - 55663 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Species
Dysgonomonas sp003523545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.