Cluster: ChuDM_2017_SRR8942396_bin.6_CGC45
🧬 Cluster Details
- Gene Count: 27
- CAZyme Count: 12
- Substrate:
- Genome ID: ChuDM_2017_SRR8942396_bin.6
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_19 | 15761 | 16837 | - | 2.A.59.1.2 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_20 | 16840 | 17184 | - | LMWPc |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_21 | 17321 | 18352 | + | CBM91 | GH43_10 |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_22 | 18398 | 20665 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_23 | 20670 | 22214 | + | CBM91 | GH43_12 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_24 | 22343 | 24553 | + | GH3 |
| TF | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_25 | 24832 | 28893 | + | HTH_AraC |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_26 | 29121 | 30230 | + | CBM32 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_27 | 30250 | 32568 | + | GH92 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_28 | 32578 | 34941 | + | GH92 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_29 | 34964 | 37237 | + | GH92 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_30 | 37284 | 40454 | + | 1.B.14.6.1 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_31 | 40476 | 42182 | + | 8.A.46.1.3 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_32 | 42266 | 45850 | + | GH2 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_33 | 45985 | 48321 | - | GH35 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_34 | 48464 | 50752 | - | GH92 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_35 | 50794 | 51969 | - | 2.A.1.7.16 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_36 | 52086 | 54827 | - | GH92 |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_37 | 54940 | 55221 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_38 | 55224 | 58664 | - | GH38 |
| sulfatase | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_39 | 58818 | 59759 | - | S1_48 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_40 | 59793 | 61418 | - | 8.A.46.1.6 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_41 | 61431 | 64460 | - | 1.B.14.6.1 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_42 | 64524 | 67202 | - | ROK |
| TF | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_43 | 67626 | 68357 | + | GntR |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_44 | 68579 | 70108 | - | 8.A.46.3.3 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_29943 | ChuDM_2017_SRR8942396_bin.6_k119_29943_45 | 70123 | 73215 | - | 1.B.14.6.1 |
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_19
Type: TC
Location: 15761 - 16837 (-)
Type: TC
Location: 15761 - 16837 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_20
Type: pfam
Location: 16840 - 17184 (-)
Type: pfam
Location: 16840 - 17184 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_21
Type: CAZyme
Location: 17321 - 18352 (+)
Type: CAZyme
Location: 17321 - 18352 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_22
Type:
Location: 18398 - 20665 (+)
Type:
Location: 18398 - 20665 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_23
Type: CAZyme
Location: 20670 - 22214 (+)
Type: CAZyme
Location: 20670 - 22214 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_24
Type: CAZyme
Location: 22343 - 24553 (+)
Type: CAZyme
Location: 22343 - 24553 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_25
Type: TF
Location: 24832 - 28893 (+)
Type: TF
Location: 24832 - 28893 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_26
Type: CAZyme
Location: 29121 - 30230 (+)
Type: CAZyme
Location: 29121 - 30230 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_27
Type: CAZyme
Location: 30250 - 32568 (+)
Type: CAZyme
Location: 30250 - 32568 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_28
Type: CAZyme
Location: 32578 - 34941 (+)
Type: CAZyme
Location: 32578 - 34941 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_29
Type: CAZyme
Location: 34964 - 37237 (+)
Type: CAZyme
Location: 34964 - 37237 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_30
Type: TC
Location: 37284 - 40454 (+)
Type: TC
Location: 37284 - 40454 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_31
Type: TC
Location: 40476 - 42182 (+)
Type: TC
Location: 40476 - 42182 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_32
Type: CAZyme
Location: 42266 - 45850 (+)
Type: CAZyme
Location: 42266 - 45850 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_33
Type: CAZyme
Location: 45985 - 48321 (-)
Type: CAZyme
Location: 45985 - 48321 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_34
Type: CAZyme
Location: 48464 - 50752 (-)
Type: CAZyme
Location: 48464 - 50752 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_35
Type: TC
Location: 50794 - 51969 (-)
Type: TC
Location: 50794 - 51969 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_36
Type: CAZyme
Location: 52086 - 54827 (-)
Type: CAZyme
Location: 52086 - 54827 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_37
Type:
Location: 54940 - 55221 (-)
Type:
Location: 54940 - 55221 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_38
Type: CAZyme
Location: 55224 - 58664 (-)
Type: CAZyme
Location: 55224 - 58664 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_39
Type: sulfatase
Location: 58818 - 59759 (-)
Type: sulfatase
Location: 58818 - 59759 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_40
Type: TC
Location: 59793 - 61418 (-)
Type: TC
Location: 59793 - 61418 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_41
Type: TC
Location: 61431 - 64460 (-)
Type: TC
Location: 61431 - 64460 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_42
Type: pfam
Location: 64524 - 67202 (-)
Type: pfam
Location: 64524 - 67202 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_43
Type: TF
Location: 67626 - 68357 (+)
Type: TF
Location: 67626 - 68357 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_44
Type: TC
Location: 68579 - 70108 (-)
Type: TC
Location: 68579 - 70108 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_29943_45
Type: TC
Location: 70123 - 73215 (-)
Type: TC
Location: 70123 - 73215 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Species
Dysgonomonas sp003523545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.