Cluster: ChuDM_2017_SRR8942396_bin.6_CGC44
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: ChuDM_2017_SRR8942396_bin.6
- CGC Family ID: CGCFAM_00001
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942396_bin.6_k119_26848 | ChuDM_2017_SRR8942396_bin.6_k119_26848_1 | 238 | 3390 | + | 1.B.14.6.1 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_26848 | ChuDM_2017_SRR8942396_bin.6_k119_26848_2 | 3402 | 5198 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942396_bin.6_k119_26848 | ChuDM_2017_SRR8942396_bin.6_k119_26848_3 | 5227 | 5850 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_26848 | ChuDM_2017_SRR8942396_bin.6_k119_26848_4 | 6006 | 7211 | + | PL38 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_26848 | ChuDM_2017_SRR8942396_bin.6_k119_26848_5 | 7249 | 8496 | + | GH88 |
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_26848_1
Type: TC
Location: 238 - 3390 (+)
Type: TC
Location: 238 - 3390 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_26848_2
Type: pfam
Location: 3402 - 5198 (+)
Type: pfam
Location: 3402 - 5198 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_26848_3
Type:
Location: 5227 - 5850 (+)
Type:
Location: 5227 - 5850 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_26848_4
Type: CAZyme
Location: 6006 - 7211 (+)
Type: CAZyme
Location: 6006 - 7211 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_26848_5
Type: CAZyme
Location: 7249 - 8496 (+)
Type: CAZyme
Location: 7249 - 8496 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Species
Dysgonomonas sp003523545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.