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Cluster: ChuDM_2017_SRR8942396_bin.6_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ChuDM_2017_SRR8942396_bin.6_k119_26697 ChuDM_2017_SRR8942396_bin.6_k119_26697_316 355373 356581 + 3.A.1.122.14
TC ChuDM_2017_SRR8942396_bin.6_k119_26697 ChuDM_2017_SRR8942396_bin.6_k119_26697_317 356602 357861 + 3.A.1.122.2
TC ChuDM_2017_SRR8942396_bin.6_k119_26697 ChuDM_2017_SRR8942396_bin.6_k119_26697_318 357980 359236 + 3.A.1.122.2
pfam ChuDM_2017_SRR8942396_bin.6_k119_26697 ChuDM_2017_SRR8942396_bin.6_k119_26697_319 359276 360424 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
pfam ChuDM_2017_SRR8942396_bin.6_k119_26697 ChuDM_2017_SRR8942396_bin.6_k119_26697_320 360458 361804 + OEP | OEP
CAZyme ChuDM_2017_SRR8942396_bin.6_k119_26697 ChuDM_2017_SRR8942396_bin.6_k119_26697_321 361915 363507 + GH31_19
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_26697_316
Type: TC
Location: 355373 - 356581 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_26697_317
Type: TC
Location: 356602 - 357861 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_26697_318
Type: TC
Location: 357980 - 359236 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_26697_319
Type: pfam
Location: 359276 - 360424 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_26697_320
Type: pfam
Location: 360458 - 361804 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_26697_321
Type: CAZyme
Location: 361915 - 363507 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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